LncRNA Information
ID EL1303 Name TCONS_00056386 Aliases N/A
Species Populus tomentosa Chromosome N/A Start site N/A
End site N/A Chain N/A Exon NO. N/A
Assembly N/A Class lincRNA NCBI accession N/A
Ensembl N/A Sequence N/A


Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
RNA-seq/qRT-PCR wood formation up-regulated N/A Genes encoding glucosyltransferases were predicted as targets of TCONS_00056386 (Table 3; Fig. 3b). Besides the genes related to cellulose, lignin and glucosyltransferase, POPTR_0010s15950.1 (Pt-GA2.3) encodes GA2ox and was predicted as a target of TCONS_00022311 (Fig. 3c). TCONS_00056386) was detected as having its highest expression in OW, then TW and lowest in NW (Supplementary material S5) by RNA-seq and a similar expression pattern was also detected by qRT-PCR. 25230698 PLNlncRbase
 


Interaction
Interaction target Level of interaction Type of interaction Description PMID Source
Pt-GA2.3 RNA-DNA regulation Genes encoding glucosyltransferases were predicted as targets of TCONS_00056386 25230698 PLNlncRbase