| LncRNA Information | ||||||
|---|---|---|---|---|---|---|
| ID | EL1172 | Name | Rubie | Aliases | N/A | |
| Species | Mus musculus | Chromosome | 14 | Start site | 46570213 | |
| End site | 46575847 | Chain | minus | Exon NO. | 5 | |
| Assembly | Ensembl Release 89 | Class | lincRNA | NCBI accession | NR_046459 | |
| Ensembl | ENSMUSG00000085123 | Sequence | ||||
| Function (not disease relevant) | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Methods | Sample/condition | Expression pattern | Dysfunction type | Description | PMID | Source | |||
| positional cloning | wildtype SWR/J mice | N/A | N/A | Rubie is the gene mutated in Ecl mice, that it is involved in regulating inner ear expression of Bmp4, and that aberrant Bmp4 expression contributes to the Ecl phenotype. | 22253730 | ||||
| Interaction | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Interaction target | Level of interaction | Type of interaction | Description | PMID | Source | ||||
| Bmp4 | RNA-Protein | regulation | Rubie lies in the conserved gene desert upstream of Bmp4, within a region previously shown to be important for inner ear expression of Bmp4. the expression patterns of Bmp4 and Rubie are nearly identical in developing inner ears. | 22253730 | |||||