LncRNA Information
ID	EL0971	Name	Nctc1	Aliases	9530074L01; Rhit1
Species	Mus musculus	Chromosome	7	Start site	142544609
End site	142558596	Chain	minus	Exon NO.	3
Assembly	Ensembl Release 89	Class	lincRNA	NCBI accession	NR_002452
Ensembl	ENSMUSG00000087090	Sequence

Function (not disease relevant)
Methods	Sample/condition	Expression pattern	Dysfunction type	Description	PMID	Source
ChIP, qRT-PCR	Myoblasts	N/A	N/A	Nctc1 is co-regulated with Igf2 and H19 and physically interacts with the shared muscle enhancer. In fact, all three co-regulated genes have the potential to interact not only with the shared enhancer but also with each other via their enhancer interactions	23221643
N/A	N/A	N/A	expression	enhancer function requires transcription in cis of a long non-coding RNA, Nctc1.	23842673

Interaction
Interaction target	Level of interaction	Type of interaction	Description	PMID	Source
Igf2/H19 shared muscle enhancer	RNA-DNA	regulation	Nctc1 is co-regulated with Igf2 and H19 and physically interacts with the shared muscle enhancer. In fact, all three co-regulated genes have the potential to interact not only with the shared enhancer but also with each other via their enhancer interactions.	23221643