LncRNA Information
ID EL0615 Name IPS1 Aliases N/A
Species Nicotiana benthamiana Chromosome N/A Start site N/A
End site N/A Chain N/A Exon NO. N/A
Assembly N/A Class lincRNA NCBI accession N/A
Ensembl N/A Sequence N/A


Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
Northern blot/qRT-PCR phosphate balance up-regulated N/A The effect of miR-399 on PHO2: GFP was suppressed by simultaneous expression of IPS1, and a mutant form of IPS1 with reduced complementarity to miR-399 did not affect miR-399-mediated silencing of PHO2: GFP. Finally, we reconstituted the interaction between IPS1, miR-399 and PHO2 in a system in which complementary and compensatory mutations were introduced in all three components. 17643101 PLNlncRbase
 


Interaction
Interaction target Level of interaction Type of interaction Description PMID Source
PHO2 RNA-RNA regulation IPS1 overexpression results in increased accumulation of the miR-399 target PHO2 mRNA and, concomitantly, in reduced shoot Pi content. 17643101 PLNlncRbase