LncRNA Information
ID EL0826 Name LOC105435934 Aliases CsM10
Species Cucumis sativus Chromosome 6 Start site 25308521
End site 25312576 Chain plus Exon NO. 5
Assembly ASM407v2 Class N/A NCBI accession XR_969890, XR_969892, XR_969891, XR_969893, XR_969894
Ensembl N/A Sequence


Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
RT-PCR cotyledons up-regulated N/A The CsM10 gene was not expressed in the root tissues, but was expressed in the cotyledons. Originating in cucumber floral buds isolated by differential display and differential hybridization. The CsM10 transcript levels in the apical tissues varied with different seedling developmental stages. CsM10 expression does not depend on phytohormones. CsM10 is related to male sex differentiation in the cucumber. (Jeongki et al., 2005) CsM10 was isolated using differential display reverse transcription PCR, which showed differential expression patterns in different tissues, seedling developmental stages and photoperiods. CsM10 habours a 179 bp sequence with high sequence homology to a family of abiotic stress-associated ncRNAs known as the CR20-GUT15-Related (CGR) family, suggesting a role in the regulation of gene expression. (Au et al., 2011) 21525783 PLNlncRbase