LncRNA Information
ID EL0616 Name IPS1 Aliases N/A
Species Populus tremula Chromosome N/A Start site N/A
End site N/A Chain N/A Exon NO. N/A
Assembly N/A Class lincRNA NCBI accession N/A
Ensembl N/A Sequence N/A


Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
Northern blot/qRT-PCR phosphate balance up-regulated N/A IPS1 RNA is not cleaved but instead sequesters miR-399. Thus, IPS1 overexpression results in increased accumulation of the miR-399 target PHO2 mRNA and, concomitantly, in reduced shoot Pi content5–8. Engineering of IPS1 to be cleavable abolishes its inhibitory activity on miR-399. 17643101 PLNlncRbase
 


Interaction
Interaction target Level of interaction Type of interaction Description PMID Source
PHO2 RNA-RNA regulation IPS1 overexpression results in increased accumulation of the miR-399 target PHO2 mRNA and, concomitantly, in reduced shoot Pi content. 17643101 PLNlncRbase