LncRNA Information
ID EL0249 Name BRCA1 Aliases BRCAI; BRCC1; BROVCA1; FANCS; IRIS; PNCA4; PPP1R53; PSCP; RNF53
Species Homo sapiens Chromosome 17 Start site 43044295
End site 43170245 Chain minus Exon NO. 24
Assembly Ensembl Release 89 Class retained intron NCBI accession NR_027676
Ensembl ENSG00000012048 Sequence


Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
knockdown human fibroblast cells N/A expression Gene expression analysis after RNAi treatment targeted against DDSR1 revealed 119 genes that show differential expression. 26697398
microarray, qRT-PCR N/A N/A interaction Loss of DDSR1 impairs cell proliferation and DDR signaling and reduces DNA repair capacity by homologous recombination (HR). The HR defect in the absence of DDSR1 is marked by aberrant accumulation of BRCA1 and RAP80 at DSB sites. 26411689
 


Interaction
Interaction target Level of interaction Type of interaction Description PMID Source
BRCA1 RNA-DNA regulation In line with a role in regulating HR, DDSR1 interacts with BRCA1 and hnRNPUL1, an RNA-binding protein involved in DNA end resection. 26411689
hnRNPUL1 RNA-Protein regulation In line with a role in regulating HR, DDSR1 interacts with BRCA1 and hnRNPUL1, an RNA-binding protein involved in DNA end resection. 26411689