LncRNA Information
ID EL1495 Name XLOC_007072 Aliases N/A
Species Oryza sativa Chromosome N/A Start site N/A
End site N/A Chain N/A Exon NO. N/A
Assembly N/A Class lincRNA NCBI accession N/A
Ensembl N/A Sequence N/A


Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
qRT-PCR reproductive stage N/A N/A lncRNA (XLOC_0063639 or XLOC_007072) that is highly expressed during the reproductive stage were introduced into rice protoplasts separately. Both XLOC_0063639 and XLOC_007072 dramatically increased the mRNA abundance of corresponding miRNA (OsmiR160 and OsmiR164) targets (LOC_Os02g36880 for miR164 [59]; LOC_Os06G47150 and LOC_Os10g33940 for miR160 [60]) in their transiently expressed protoplasts, suggesting that XLOC_0063639 and XLOC_007072 indeed inhibited the functions of OsmiR160 and miR164, respectively (Figure 6C,E-H). 25517485 PLNlncRbase
 


Interaction
Interaction target Level of interaction Type of interaction Description PMID Source
miR164 RNA-RNA binding identify several lncRNAs as competing endogenous RNAs (ceRNAs), which sequester miR160 or miR164 in a type of target mimicry 25517485 PLNlncRbase